i have made the amy butler weekend bag 5 times and the set in bottom never is perfect. It is too big and I always end up making a pleat here and there to get it to fit the bag. Either that, or sometimes I actually remember to cut it smaller.
Luckily, it's the bottom and you'll never see it again.
picture
http://www.flickr.com/photos/meringuedesigns/2211151260/in/set-72157601903227776/